Ranomics Platform
Official7 toolsby ranomics
Wet-lab triage for AI binder-design agents. Yeast display, mammalian display, DMS at library scale.
Provides wet-lab triage for protein binder-design agents using yeast display and mammalian display.
Captured live from the server via tools/list.
list_targets
List the calibrated antigen catalogue. Each entry carries target_id, supported_experiment_types, and typical_campaign_range_usd. Use the target_id on submit_experiment to skip human scoping, or use the custom target shape for a one-off antigen.
No parameters.
estimate_cost
Non-binding USD cost estimate for a hypothetical submission. Pass target_kind='catalog' + target_id for a calibrated band (requires_human_quote=false), or target_kind='custom' for a placeholder order-of-magnitude band (requires_human_quote=true). Call BEFORE submit_experiment when budgeting matters.
Parameters (5)
- experiment_typestringrequired
- candidate_countinteger
- library_diversityinteger
- target_kindstring
- target_idstring
submit_experiment
Submit a binder panel for wet-lab triage. The experiment_spec mirrors the curl /api/v1/experiments contract: experiment_type (yeast_display/mammalian_display/dms), target (target_id or custom), library_design, and sequences as {user_key: amino_acid_string} (use ':' as a multi-chain separator). Optional webhook_url receives signed POSTs on every status transition. Optional idempotency_key dedupes retries. Returns the created experiment with status WaitingForConfirmation and a status_log. Poll get_experiment_status to track progress, get_experiment_results when status_log shows Done.
Parameters (4)
- namestring
- webhook_urlstring
- experiment_specobjectrequired
- idempotency_keystring
get_experiment_status
Poll an experiment by id. Returns the current status (Draft/WaitingForConfirmation/QuoteSent/WaitingForMaterials/LibraryConstruction/Sorting/NGS/DataAnalysis/InReview/Done), the orthogonal results_status (none/partial/all), and the status_log. Cheap; safe to poll every few minutes. Webhooks are preferred for production agents.
Parameters (1)
- experiment_idstringrequired
get_experiment_quote
Fetch the quote for an experiment once status is QuoteSent. Returns quote_id, total_usd, currency (default USD), line_items, valid_until, and terms_url. If status is QuoteSent but the scoping team has not posted a price yet, total_usd is null and a 'note' field explains it is being finalised; poll again until total_usd populates. Pass the quote_id to confirm_quote to accept.
Parameters (1)
- experiment_idstringrequired
confirm_quote
Accept a quote. Moves the experiment from QuoteSent to WaitingForMaterials. Call after a human (or budget guard) has approved the total_usd from get_experiment_quote. Returns 409 quote_not_confirmable if status is not QuoteSent, or 409 quote_not_finalized if a price has not been posted yet (total_usd null). Fetch get_experiment_quote and wait for total_usd before confirming.
Parameters (1)
- quote_idstringrequired
get_experiment_results
Fetch results once results_status is 'partial' or 'all' (check via get_experiment_status first). Returns per-sequence pre/post counts, log2_enrichment, percentile, called_hit booleans, plus signed download URLs for the enrichment table CSV, hits FASTA, and (when opted in) raw FASTQ. Yeast-display result shape; mammalian and DMS use the same envelope.
Parameters (1)
- experiment_idstringrequired
README not available yet.
Install
Remote endpoint
Streamable HTTPHosted server - connect over the network, no local install.
https://mcp.ranomics.com/mcpclaude_desktop_config.json
{
"mcpServers": {
"mcp": {
"command": "npx",
"args": [
"-y",
"mcp-remote",
"https://mcp.ranomics.com/mcp"
]
}
}
}Desktop config is stdio-only; this bridges via mcp-remote. Native remote: Settings > Connectors.