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Ncbi Variation

Official39 tools

by pipeworx-io · TypeScript

dbSNP refSNP records and HGVS/SPDI/rsID normalization for human genetic variants, from NCBI…

Model Context Protocol (MCP) Server: io.github.pipeworx-io/ncbi-variation

The MCP server io.github.pipeworx-io/ncbi-variation provides access to dbSNP refSNP records and supports HGVS/SPDI/rsID normalization for human genetic variants, sourced from NCBI. The server description indicates it focuses on normalizing variant identifiers across commonly used formats for downstream use.

🛠️ Key Features

  • dbSNP refSNP record handling
  • HGVS normalization
  • SPDI normalization
  • rsID normalization
  • Human genetic variant coverage
  • NCBI-sourced data

🚀 Use Cases

  • Convert variant representations between HGVS, SPDI, and rsID
  • Retrieve dbSNP refSNP context for human variants
  • Support variant normalization workflows using NCBI records

⚡ Developer Benefits

  • Standardizes variant identifiers to reduce format mismatches
  • Provides structured access to dbSNP-backed variant data from NCBI

⚠️ Limitations

  • No tool count or additional capabilities were provided in the available server data.

Topics

mcpmcp-servermodel-context-protocolpipeworxncbi-variation